listMarts {biomaRt} | R Documentation |
This function returns a list of BioMart databases to which biomaRt can connect to. By default all public BioMart databases are displayed. To establish a connection use the useMart function.
listMarts(mart, host="www.biomart.org", path="/biomart/martservice", port=80, includeHosts = FALSE, archive=FALSE, ssl.verifypeer=TRUE, verbose = FALSE)
mart |
mart object created with the useMart function |
host |
host to connect to if different then www.biomart.org |
path |
path to martservice that should be pasted behind the host to get to web service URL |
port |
port to use in HTTP communication |
includeHosts |
boolean to indicate if function should return host of the BioMart databases |
archive |
Boolean to indicate if you want to access archived versions of BioMart database |
ssl.verifypeer |
Set SSL peer verification on or off. By default ssl.verifypeer is set to TRUE |
verbose |
Give detailed output of what the method is doing, for debugging purposes |
Steffen Durinck
if(interactive()){ listMarts() }